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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015910447.1_cds_XP_016460479.1_53896
CDS Infomation

[gene=LOC107783961] [db_xref=GeneID:107783961] [protein=phospholipase A(1) LCAT3-like] [protein_id=XP_016460479.1] [location=complement(join(66288..66461,67015..67068,68049..68103,68209..68366,69205..69384,69968..70068,70929..70980,71280..71415,71604..71731,72209..72300,72855..73083))] [gbkey=CDS]
Sequence

ATGTTCAAACAATACTGCTGTTGTCTCTTTCCGGGTCGGAGCTCCGACTCCGTCAACGAT
GTTGTGGCTGATAGAGACCCTGTATTGTTGGTTTCCGGTCTTGCCGGGTCCATTCTCCAT
TCAAAGAGTAAGAAACTGGGCGGTTTTGAAACCCGGGTTTGGGTCCGACTTCTCCTTGCT
GAACTTGAGTTTAAGAATAAGTTATGGTCCATTTACAATCCTAAAACAGGGTATACAGAG
TCATTGGATGACAGCACAGAGATAGTAGTGCCTCAAGATGATTATGGGCTATATGCAATT
GATATTTTGGATCCTTCTATGATGGTGAAGTGTGTACACTTGACCGGTGTATACCATTTT
CATGATATGATTGATATGCTCGTCAAATGTGGATATGAAAAAGGAACCACATTGTTCGGT
TTTGGTTACGACTTCCGCCAAAGCAATAGGATTGACAGGACAATGAATGACCTGAAAGCA
AAGCTAGAGACAGCTTATAAAGCTTCTGGGGGAAGAAAAGTCGATATTATTTCGCATTCC
ATGGGTGGATTGTTAATCAAATGTTTCATTTCTCTTTATAGTGATGTATTTTCCAAGTAT
GTGAATAAGTGGATTACCATTGCCACTCCTTTTCAAGGTGCACCTGGATGCATTAATGAT
TCTCTCTTAACTGGGGTGCAGTTCGTTGATGGATTTGAAAGCAACTTTTTCGTGTCAAGG
TGGACAATGCATCAATTGTTGGTTGAGTGCCCATCAATCTACGAGATGTTGCCCAATCCC
GACTTCAAGTGGGCAAAGCAACCTGAGATTTTGGTGTGGAGGAAAAAATCTAAGGAGGGG
GAGACAGTGGTTGAACTAGAATGTTATGGCGCTAGTACAAGTGTGACTCTCTTTCAAGAA
GCATTGAAGAGCAATGAGCTCAACTTAAATGGGAAAACAGTGGCTCTACCTTTCAACTTA
TCAATTCTTGATTGGGCAGCTAGTACTCGCAAAATTTTAAACATTGCTCAATTACCACAA
GGAATTCCTTTTTATAGCATCTACGGGACATCTTTTGATACACCTTTTGATGTTTGTTAT
GGTTCAAAGGCTTCACCAATCGAGGACCTAACGAATGTCTGCCATACTATGCCGCAATAC
TCCTACGTGGACGGTGATGGAACTGTTCCAGCTGAATCAGCAAAGGCGGATAATTTTAAA
GCGGTGGAAAGAGTAGGAGTTCAAGGTGGTCACAGGGAACTATTAAGAGATGAGAAAGTC
TTCCAGCTTCTCAAGAAGTGGCTTGGCGTCACCGATAACAAGAAGGCGCATTCCAGGTCC
TCCAGGGTAATGGACCTTTATTCAGGTCAAAAGCTGTAA

Peptide Sequence

PEP ID

XP_016460479.1
PEP Infomation

PREDICTED: phospholipase A(1) LCAT3-like [Nicotiana tabacum]
Sequence

MFKQYCCCLFPGRSSDSVNDVVADRDPVLLVSGLAGSILHSKSKKLGGFETRVWVRLLLA
ELEFKNKLWSIYNPKTGYTESLDDSTEIVVPQDDYGLYAIDILDPSMMVKCVHLTGVYHF
HDMIDMLVKCGYEKGTTLFGFGYDFRQSNRIDRTMNDLKAKLETAYKASGGRKVDIISHS
MGGLLIKCFISLYSDVFSKYVNKWITIATPFQGAPGCINDSLLTGVQFVDGFESNFFVSR
WTMHQLLVECPSIYEMLPNPDFKWAKQPEILVWRKKSKEGETVVELECYGASTSVTLFQE
ALKSNELNLNGKTVALPFNLSILDWAASTRKILNIAQLPQGIPFYSIYGTSFDTPFDVCY
GSKASPIEDLTNVCHTMPQYSYVDGDGTVPAESAKADNFKAVERVGVQGGHRELLRDEKV
FQLLKKWLGVTDNKKAHSRSSRVMDLYSGQKL

Transcript Sequence

Gene sequence data has not been registered.